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NSCLC-RADIOGENOMICS-STANFORD

NSCLC Radiogenomics-Stanford | NSCLC Radiogenomics: Initial Stanford Study of 26 Cases

DOI: 10.7937/K9/TCIA.2014.X7ONY6B1 | Data Citation Required | Analysis Result

Related Collections Size Updated
7.87GB 2013/03/01

Summary

This subset of NSCLC Radiogenomics contains images from patients with non-small cell lung cancer (NSCLC) imaged prior to surgical excision with both thin-section computed tomography (CT) and whole body positron emissions tomography (PET)/CT scans acquired under Institutional Review Board approval from Stanford University and the Veterans Administration Palo Alto Health Care System. The first installment of 26 cases (see shared list “NSCLC Radiogenomics: Initial Stanford Study of 26 Cases”) corresponds to microarray data acquired from the excised samples, which is available on the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus, where Digital Imaging and Communications in Medicine (DICOM) patient names are identical to microarray sample names. 

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Data Access

Version 1: Updated 2013/03/01

Title Data Type Format Access Points Subjects Studies Series Images License
Images SEG, CT, PT DICOM
Download requires NBIA Data Retriever
25 49 114 22,083 CC BY 3.0
Microarray Samples CC BY 3.0

Citations & Data Usage Policy

Data Citation Required: Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution must include the following citation, including the Digital Object Identifier:

Data Citation

Napel, Sandy, & Plevritis, Sylvia K. (2014). NSCLC Radiogenomics: Initial Stanford Study of 26 Cases (NSCLC Radiogenomics-Stanford) [Data Set]. The Cancer Imaging Archive. http://doi.org/10.7937/K9/TCIA.2014.X7ONY6B1

Detailed Description

The original 26 cases referenced in this manuscript have been renamed. A list of the mapping between GSM-XXX Patient IDs and R01-XXX Patient IDs can be found here.

Publications Using This Data

TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you’d like to add please contact TCIA’s Helpdesk.

Publication Citation

Gevaert, O., Xu, J., Hoang, C. D., Leung, A. N., Xu, Y., Quon, A., … Plevritis, S. K. (2012, August). Non-Small Cell Lung Cancer: Identifying Prognostic Imaging Biomarkers by Leveraging Public Gene Expression Microarray Data -Methods and Preliminary Results. Radiology. Radiological Society of North America (RSNA). http://doi.org/10.1148/radiol.12111607

TCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7

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