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LUAD-CT-SURVIVAL

LUAD-CT-Survival | Long and Short Survival in Adenocarcinoma Lung CTs

DOI: 10.7937/K9/TCIA.2017.0tv7b9x1 | Data Citation Required | Analysis Result

Cancer Types Location Subjects Related Collections Size Supporting Data Updated
Lung Adenocarcinoma Chest 40 941KB Tumor segmentations, radiomic image features 2017/08/11

Summary

The dataset consists of pre-surgical chest CT images of 40 subjects from the H. Lee Moffitt Cancer Center & Research Institute, Tampa, Florida. The CT images were acquired by standard-of-care, contrast-enhanced CT scans among patients who had non-small cell cancer with biopsy-verified adenocarcinoma with 2 years of follow-up. A region-growing algorithm segmented the tumor with seed points that were chosen by radiologists.

The adenocarcinoma cases are divided into the upper and lower quartiles of survival. Both the lower and upper quartiles have 20 cases. The lower quartile survival timeline is 103 to 498 days while the upper quartile timeline is 1351 to 2163 days. The average survival of the lower and upper quartiles is 288 days and 1569 days respectively. The median survival for the lower and upper quartiles is 289 and 1551 days respectively. The overall mean survival time is 879 days and median survival time is 925 days. Three of these cases, QIN-LSC-0009, QIN-LSC-0014, and QIN-LSC-0064 appear in  LungCT-Diagnosis  collection, while the remaining 37 cases are from the  QIN Lung CT  collection.

Data Access

Version 1: Updated 2017/08/11

Title Data Type Format Access Points Subjects Studies Series Images License
Tumor Segmentations Segmentations NIFTI and ZIP 40 40 CC BY 3.0
Image Features and Patient Survival CSV CC BY 3.0

Collections Used In This Analysis Result

Title Data Type Format Access Points Subjects Studies Series Images License
Original Source Images CT DICOM 40 40 40 3,142 CC BY 3.0

Citations & Data Usage Policy

Data Citation Required: Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution must include the following citation, including the Digital Object Identifier:

Data Citation

Goldgof D., Hall L., Hawkins S.H., Schabath M.B., Stringfield O., Garcia A., Balagurunathan Y., Kim J., Eschrich S., Berglund A.E., Gatenby R., Gillies R.J. (2017) Long and Short Survival in Adenocarcinoma Lung CTs [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/K9/TCIA.2017.0tv7b9x1

Detailed Description

Image data is available in DICOM format. Segmentation data is available in .nii.gz format.

 

Labels are available in .csv format. The first column is subject identification. The second column is survival class.  Subsequent columns are computed image features which are described in the following publications:

  • Paul, R., Hawkins, S., Balagurunathan, Y., Schabath, M., Gillies, R., Hall, L., & Goldgof, D. (2016). Deep Feature Transfer Learning in Combination with Traditional Features Predicts Survival among Patients with Lung Adenocarcinoma. Tomography, 2(4), 388–395. https://doi.org/10.18383/j.tom.2016.00211
  • Hawkins, S. H., Korecki, J. N., Balagurunathan, Y., Yuhua Gu, Kumar, V., Basu, S., Hall, L. O., Goldgof, D. B., Gatenby, R. A., & Gillies, R. J. (2014). Predicting Outcomes of Nonsmall Cell Lung Cancer Using CT Image Features. IEEE Access, 2, 1418–1426. https://doi.org/10.1109/access.2014.2373335

Publications Using This Data

TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you’d like to add please contact TCIA’s Helpdesk.

Publication Citation

Paul, R., Hawkins, S., Balagurunathan, Y., Schabath, M., Gillies, R., Hall, L., & Goldgof, D. (2016). Deep Feature Transfer Learning in Combination with Traditional Features Predicts Survival among Patients with Lung Adenocarcinoma. Tomography, 2(4), 388–395. https://doi.org/10.18383/j.tom.2016.00211

Publication Citation

Hawkins, S. H., Korecki, J. N., Balagurunathan, Y., Yuhua Gu, Kumar, V., Basu, S., Hall, L. O., Goldgof, D. B., Gatenby, R. A., & Gillies, R. J. (2014). Predicting Outcomes of Nonsmall Cell Lung Cancer Using CT Image Features. IEEE Access, 2, 1418–1426. https://doi.org/10.1109/access.2014.2373335

TCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7

Collections Used In This Analysis Result

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